Tuesday, August 4, 2009

Phylogeny

Categorization of microbes

Bacilli (Bacillus, Listeria, Staphylococcus, Streptococcus)
Gamma-proteobacteria (Coxiella, Escherichia, Francisella, Salmonella, Shigella, Vibrio, Yersinia)
Clostridia (Clostridium)
Epsilon-proteobacteria (Campylobacter, Helicobacter)
dsDNA viruses (Orthopoxvirus, Rhadinovirus, Roseolovirus, Erythrovirus)
ssRNA positive-strand viruses (Calicivirdiae, Alphavirus, Coronavirus, Enterovirus, Flavivirus, Hepacivirus, Hepatovirus, Hepevirus)
Actinobacteria (Mycobacterium)
Alpha-proteobacteria (Bartonella, Brucella, Ehrlichia, Rickettsia)
Beta-proteobacteria (Burkholderia)
Spirochaetes (Borrelia)
Eukaryotic pathogens (Acanthamoeba, Babesia, Cryptosporidium, Cyclospora, Toxoplasma, Giardia, Entamoeba, Coccidioides, Encephalitozoon)
ssRNA negative-strand viruses (Filoviridae, Orthomyxoviridae, Arenavirus, Hantavirus, Henipavirus, Lyssavirus, Nairovirus, Orthobunyavirus, Phlebovirus, Rubulavirus)

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